Citing Swell

If Swell contributed to your research, please cite both the methods paper and the archived software release.

Methods paper

The methods paper citation is pending publication. Until the final citation is available, cite the archived software release used for your analysis.

Dunford, C. et al. Manuscript title. Journal (Year). DOI: 10.xxxx/xxxxxx

BibTeX:

@article{swell_methods,
  author  = {Dunford, Clay and others},
  title   = {Manuscript title},
  journal = {Journal},
  year    = {YYYY},
  doi     = {10.xxxx/xxxxxx}
}

Software release

Each tagged release is archived on Zenodo with its own DOI. Cite the specific version you used.

The project-level Zenodo DOI is pending. Replace the placeholder DOI below with the versioned DOI for the release used in your analysis once it is available.

@software{swell_software,
  author  = {Dunford, Clay},
  title   = {Swell: intrinsic optical signal imaging analysis for spreading depolarization event identification and segmentation},
  year    = {YYYY},
  version = {vX.Y.Z},
  doi     = {10.5281/zenodo.xxxxxxx},
  url     = {https://github.com/ParrishLab/Swell}
}

Reproducing manuscript results

Example datasets, expected outputs, and the exact release tag used for manuscript figures will be linked when the manuscript materials are finalized.

The manuscript figures were produced with Swell version vX.Y.Z using the default metrics settings documented in GUI reference.